Sample Components: Difference between revisions
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{| class="wikitable" | {| class="wikitable" | ||
|+Nucleic Acid (DNA, RNA) Details | |||
|'''Name''' | |'''Name''' | ||
|'''Description''' | |'''Description''' | ||
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|- | |- | ||
|NA Sequence 5’-3’ (Note: Fasta format entry) | |NA Sequence 5’-3’ | ||
|Nucleic Acid Sequence (Note: Fasta format entry) | |||
|- | |- | ||
| | |Non-Standard | ||
| | |If the sequence have non-standard bases, provide a description | ||
|- | |- | ||
|Is Covalent Linkage | |Is Covalent Linkage | ||
| | | | ||
|- | |- | ||
|Covalent Linkage | |Covalent Linkage | ||
|Define linkage type and location | |Define linkage type and location | ||
|} | |} | ||
Revision as of 23:44, 19 August 2025
← Back to Sample Columns ← Back to Creating/Cloning Samples
| Type | Subtype | Comments |
|---|---|---|
| Bio Macromolecule | Protein | |
| Nucleic Acid - DNA | ||
| Nucleic Acid - RNA | ||
| Carbohydrate | ||
| Small molecules | Metabolite | |
| Natural Product | ||
| Other organic | Organic compounds not classified elsewhere | |
| Chemical Formula | Chemical Formula | Explicit formula-based representation of a compound. |
| Polymer | Polymer | |
| Mixtures | Biological Material | |
| Environmental Sample | ||
| Components | Solvent System | |
| Buffer | ||
| Salt | ||
| Internal Standard | ||
| Indirect Referencing Standard | ||
| Additives | Detergent | |
| Lipid | ||
| Micelle | ||
| Bicelle | ||
| Nano-disk | ||
| Stretched or Compressed Gell | ||
| Excipient | ||
| Polarizing Agent | ||
| Paramagnetic compound | ||
| Other | Other | Any sample not classified in the above categories |
| Name | Description |
| Molecular Weight | Molecular weight of the protein |
| Purity (%) | Estimated percentage purity of the sample (e.g., from SDS-PAGE or gel filtration) |
| Uniport ID | Accession ID linking the protein to the UniProt database. |
| Number of subunits | How many subunits |
| AA Sequence | Exact sequence of construct in the NMR tube (including any uncleaved tags or additional amino acids) |
| Protein conformational state | Specify if the protein is globular, membrane, fibril or disordered |
| Monomer/Homo-Oligomer | Indicate if the protein exists as a monomer or homo-oligomer; if oligomeric, specify whether it is symmetric or asymmetric. |
| Modification | Users can document modifications type, location in the amino acid sequence, and an optional description. While a list of common modification types is provided, custom types may also be entered.
Suggested modification types:
|
| Name | Description |
| GenBank ID | |
| NA Sequence 5’-3’ | Nucleic Acid Sequence (Note: Fasta format entry) |
| Non-Standard | If the sequence have non-standard bases, provide a description |
| Is Covalent Linkage | |
| Covalent Linkage | Define linkage type and location |
