Knowledgebase Datasets

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Revision as of 13:46, 18 June 2025 by Mtest (talk | contribs) (Overview)
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Overview

KB Datasets are exemplar experimental datasets, collected on test samples, designed to guide users through implementation on samples ???. The pulse programs are well vetted and include all the necessary files necessary to run the experiment including protocols for all aspects of experiment setup

KB Datasets contain:

  • Pulse programs
  • Parameter files
  • Waveform files
  • Time-domain data
  • Sample metadata
  • Protocols
    • Sample preparation
    • Instrument setup
    • Experiment setup
    • Data processing
    • Data analysis
  • Processing scripts
  • Processed data

Access

The KB Datasets are Public and are available to all users (those logged in or not).

KB Dataset Navigation

For non-authenticated users navigate to Public Datasets from the Resource Connector. Then select Knowledgebase Datasets from the navigation bar on the left hand side

For authenticated user navigate to the Data Browsers --> Datasets and select Knowledgebase Datasets from the navigation bar on the left hand side

Navigation

KB Datasets are divided into four main categories:

  • Bio Solids
  • Materials Solids
  • Bio Solution
  • Metabolomics

Each of the four main categories are further divided into sub-categories two levels deep. This allows easy navigation across all the KB datasets. Note that highlighting a higher level in the hierarchal view will show all datasets underneath from that point.

Sorting and Filtering

Each of the columns in the Dataset Browser are sortable and editable. Authenticated users may customize columns, but for non-authenticated users a defined list of columns are presented.

Note that from the Dataset Browser, All Datasets or All Public Datasets you may filter on the KB column to locate KB Datasets as well.