Knowledgebase Datasets

Overview

KB Datasets are exemplar experimental datasets, collected on test samples, designed to guide users through implementation on samples ???. The pulse programs are well vetted and include all the necessary files necessary to run the experiment including protocols for all aspects of experiment setup

KB Datasets contain:

• Pulse programs
• Parameter files
• Waveform files
• Time-domain data
• Sample metadata
• Protocols
  • Sample preparation
  • Instrument setup
  • Experiment setup
  • Data processing
  • Data analysis
• Processing scripts
• Processed data

Access

The KB Datasets are Public and are available to all users (those logged in or not).

KB Dataset Navigation

For non-authenticated users navigate to Public Datasets from the Resource Connector. Then select Knowledgebase Datasets from the navigation bar on the left hand side

For authenticated user navigate to the Data Browsers --> Datasets and select Knowledgebase Datasets from the navigation bar on the left hand side

Navigation

KB Datasets are divided into four main categories:

• Bio Solids
• Materials Solids
• Bio Solution
• Metabolomics

Each of the four main categories are further divided into sub-categories two levels deep. This allows easy navigation across all the KB datasets. Note that highlighting a higher level in the hierarchal view will show all datasets underneath from that point.

Sorting and Filtering

Each of the columns in the Dataset Browser are sortable and editable. Authenticated users may customize columns, but for non-authenticated users a defined list of columns are presented.

Note that from the Dataset Browser, All Datasets or All Public Datasets you may filter on the KB column to locate KB Datasets as well.

Overview

Knowledgebase (KB) Datasets are exemplar experimental datasets collected on standardized test samples at high- and ultra-high magnetic fields. Each dataset provides a vetted pulse program along with all required files to reproduce the experiment and adapt it to other instruments or research samples.

Contents of a KB Dataset

• Pulse programs
• Parameter files
• Waveform files
• Time-domain data
• Sample metadata
• Protocols
  • Sample preparation
  • Instrument setup
  • Experiment setup
  • Data processing
  • Data analysis
• Processing scripts
• Processed data

Access

KB Datasets are publicly available to all users, whether logged in or not.

KB Dataset navigation

• For non-authenticated users: navigate to Public Datasets from the Resource Connector. Then select Knowledgebase Datasets from the left-hand navigation bar.
• For authenticated users: navigate to Data Browsers → Datasets, then select Knowledgebase Datasets from the left-hand navigation bar.

Navigation

KB Datasets are grouped into four main categories:

• Bio Solids
• Materials Solids
• Bio Solution
• Metabolomics

Each category is subdivided up to two additional levels. Selecting a higher-level entry in the hierarchy displays all datasets beneath it, enabling intuitive exploration.

Sorting and Filtering

Columns in the Dataset Browser are sortable. Authenticated users may customize which columns are shown; non-authenticated users are presented with a standard set.

You may also filter on the KB column from the All Datasets or All Public Datasets views to locate KB Datasets.